hadley / r4ds
R for data science: a book
See what the GitHub community is most excited about today.
R for data science: a book
R toolkit for single cell genomics
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
Inferring CNV from Single-Cell RNA-Seq
Fast, sensitive and accurate integration of single-cell data with Harmony
Accurate sample inference from amplicon data with single nucleotide resolution
An implementation of the Grammar of Graphics in R
renv: Project environments for R.
R package for performing 2-sample MR using MR-Base database
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
R package for detecting doublets in single-cell RNA sequencing data
Community-provided extensions to Seurat
Read flat files (csv, tsv, fwf) into R
Make Complex Heatmaps
Dataset distribution for Seurat
📊 A universal enrichment tool for interpreting omics data